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  5. Glyma.08G096200

Glyma.08G096200


Description : nine-cis-epoxycarotenoid dioxygenase 5


Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G096200
Cluster HCCA clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
A4A49_34874 No alias putative carotenoid cleavage dioxygenase 4, chloroplastic 0.03 Orthogroups_2024-Update
At3g63520 No alias Carotenoid 9,10(9',10')-cleavage dioxygenase 1... 0.04 Orthogroups_2024-Update
Brara.A00958.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Glyma.15G250100 No alias nine-cis-epoxycarotenoid dioxygenase 3 0.04 Orthogroups_2024-Update
HORVU6Hr1G068720.4 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.02 Orthogroups_2024-Update
PSME_00056181-RA No alias (at3g14440 : 662.0) Encodes ... 0.04 Orthogroups_2024-Update
Potri.001G393800 No alias nine-cis-epoxycarotenoid dioxygenase 3 0.02 Orthogroups_2024-Update
Pp1s412_7V6 No alias F3F9.10; 9-cis-epoxycarotenoid dioxygenase, putative /... 0.04 Orthogroups_2024-Update
Seita.2G035400.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Sobic.001G155300.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 127 586
No external refs found!