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  5. Glyma.08G158300

Glyma.08G158300


Description : RING/U-box superfamily protein


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G158300
Cluster HCCA clusters: Cluster_446

Target Alias Description ECC score Gene Family Method Actions
At1g14200 No alias At1g14200 [Source:UniProtKB/TrEMBL;Acc:Q9XI67] 0.04 Orthogroups_2024-Update
LOC_Os08g38060 No alias RING finger protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00026521-RA No alias (at3g19950 : 152.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Seita.8G028200.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 95 136
IPR039525 RNF126-like_zinc-ribbon 7 38
No external refs found!