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  5. Glyma.08G186600

Glyma.08G186600


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0009198 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009198_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G186600
Cluster HCCA clusters: Cluster_441

Target Alias Description ECC score Gene Family Method Actions
Pp1s18_50V6 No alias T19D16.17; pentatricopeptide (PPR) repeat-containing... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 299 327
IPR002885 Pentatricopeptide_repeat 334 379
IPR002885 Pentatricopeptide_repeat 155 202
IPR002885 Pentatricopeptide_repeat 214 272
IPR002885 Pentatricopeptide_repeat 393 447
No external refs found!