- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : tryptophan synthase beta-subunit 2
Gene families : OG_42_0002861 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002861_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Glycine release: Glyma.08G312300 | |
| Cluster | HCCA clusters: Cluster_320 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 85784 | No alias | tryptophan synthase beta-subunit 1 | 0.01 | Orthogroups_2024-Update | |
| Mp4g12300.1 | No alias | subunit beta of tryptophan synthase complex | 0.02 | Orthogroups_2024-Update | |
| Seita.6G072900.1 | No alias | subunit beta of tryptophan synthase complex & EC_4.2... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000702 | oxidized base lesion DNA N-glycosylase activity | IEP | Predicted GO |
| MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
| MF | GO:0004096 | catalase activity | IEP | Predicted GO |
| MF | GO:0004601 | peroxidase activity | IEP | Predicted GO |
| MF | GO:0004743 | pyruvate kinase activity | IEP | Predicted GO |
| BP | GO:0006284 | base-excision repair | IEP | Predicted GO |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Predicted GO |
| BP | GO:0006536 | glutamate metabolic process | IEP | Predicted GO |
| BP | GO:0006537 | glutamate biosynthetic process | IEP | Predicted GO |
| BP | GO:0006950 | response to stress | IEP | Predicted GO |
| BP | GO:0007010 | cytoskeleton organization | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| MF | GO:0008534 | oxidized purine nucleobase lesion DNA N-glycosylase activity | IEP | Predicted GO |
| MF | GO:0008565 | protein transporter activity | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0010207 | photosystem II assembly | IEP | Predicted GO |
| MF | GO:0015930 | glutamate synthase activity | IEP | Predicted GO |
| MF | GO:0016209 | antioxidant activity | IEP | Predicted GO |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Predicted GO |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Predicted GO |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Predicted GO |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | Predicted GO |
| MF | GO:0020037 | heme binding | IEP | Predicted GO |
| MF | GO:0030955 | potassium ion binding | IEP | Predicted GO |
| MF | GO:0031420 | alkali metal ion binding | IEP | Predicted GO |
| MF | GO:0032977 | membrane insertase activity | IEP | Predicted GO |
| MF | GO:0042393 | histone binding | IEP | Predicted GO |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Predicted GO |
| BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | Predicted GO |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
| MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
| BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001926 | PLP-dep | 134 | 464 |
| No external refs found! |