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  5. Glyma.08G356800

Glyma.08G356800


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G356800
Cluster HCCA clusters: Cluster_417

Target Alias Description ECC score Gene Family Method Actions
407495 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
At3g53190 No alias Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q56XU8] 0.03 Orthogroups_2024-Update
At5g48900 No alias Probable pectate lyase 20... 0.03 Orthogroups_2024-Update
Potri.008G032700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G091500 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Sopen11g003950 No alias Pectate lyase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0031023 microtubule organizing center organization IEP Predicted GO
CC GO:0035658 Mon1-Ccz1 complex IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002022 Pec_lyase 186 366
No external refs found!