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  5. Sopen09g029310

Sopen09g029310


Description : Ring finger domain


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Sopen09g029310
Cluster HCCA clusters: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G286700 No alias COP1-interacting protein 8 0.03 Orthogroups_2024-Update
LOC_Os01g58780 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g22830 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g04690 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g04450 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
Solyc01g016410 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT5G08139.1) 0.03 Orthogroups_2024-Update
Solyc09g059130 No alias LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
evm.model.contig_4465.8 No alias (at3g19950 : 80.5) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 290 332
IPR039525 RNF126-like_zinc-ribbon 17 51
No external refs found!