Sopen09g029530

Description : RF-1 domain

Gene families : OG_42_0002056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002056_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen09g029530
Cluster	HCCA clusters: Cluster_110

Target	Alias	Description	ECC score	Gene Family Method
Bradi4g11300	No alias	Peptide chain release factor 1	0.06	Orthogroups_2024-Update
Brara.D00046.1	No alias	translation peptide chain release factor *(PrfA)	0.03	Orthogroups_2024-Update
Cre16.g673617	No alias	Peptide chain release factor 1	0.02	Orthogroups_2024-Update
Glyma.19G220702	No alias	Peptide chain release factor 1	0.02	Orthogroups_2024-Update
HORVU4Hr1G032780.3	No alias	translation peptide chain release factor *(PrfA)	0.07	Orthogroups_2024-Update
Kfl00088_0110	kfl00088_0110_v1.1	(at3g62910 : 479.0) Isolated in a screen for chloroplast...	0.01	Orthogroups_2024-Update
LOC_Os11g43600	No alias	peptide chain release factor protein, putative, expressed	0.02	Orthogroups_2024-Update
Seita.8G220100.1	No alias	translation peptide chain release factor *(PrfA)	0.03	Orthogroups_2024-Update
Sobic.005G204200.1	No alias	translation peptide chain release factor *(PrfA)	0.03	Orthogroups_2024-Update
Solyc09g074650	No alias	Peptide chain release factor 1 (AHRD V3.3 *** AT3G62910.1)	0.08	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003747	translation release factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006415	translational termination	IEA	InterProScan predictions
MF	GO:0008079	translation termination factor activity	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
BP	GO:0043624	cellular protein complex disassembly	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005139	PCRF	67	261
IPR000352	Pep_chain_release_fac_I_II	268	378

External Links

No external refs found!