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  5. Glyma.09G218500

Glyma.09G218500


Description : Adaptin family protein


Gene families : OG_42_0006275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006275_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.09G218500
Cluster HCCA clusters: Cluster_506

Target Alias Description ECC score Gene Family Method Actions
Bradi2g58660 No alias Adaptin family protein 0.02 Orthogroups_2024-Update
Cre06.g310000 No alias Adaptin family protein 0.02 Orthogroups_2024-Update
Kfl00548_0130 kfl00548_0130_v1.1 (at1g31730 : 839.0) Adaptin family protein; FUNCTIONS... 0.02 Orthogroups_2024-Update
MA_41176g0010 No alias (at1g31730 : 125.0) Adaptin family protein; FUNCTIONS... 0.03 Orthogroups_2024-Update
Pp1s46_150V6 No alias putative gamma-adaptin 1 [Oryza sativa (japonica cultivar-group)] 0.05 Orthogroups_2024-Update
Sobic.003G401000.1 No alias large subunit epsilon of AP-4 vacuole cargo adaptor complex 0.03 Orthogroups_2024-Update
Solyc08g075310 No alias AP-4 complex subunit epsilon (AHRD V3.3 *** W9S8A1_9ROSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
CC GO:0030117 membrane coat IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004819 glutamine-tRNA ligase activity IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006474 N-terminal protein amino acid acetylation IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Predicted GO
BP GO:0018206 peptidyl-methionine modification IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Predicted GO
CC GO:0031417 NatC complex IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 102 641
No external refs found!