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  5. Glyma.10G013900

Glyma.10G013900


Description : beta-xylosidase 2


Gene families : OG_42_0000397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G013900
Cluster HCCA clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
112087 No alias Glycosyl hydrolase family protein 0.03 Orthogroups_2024-Update
A4A49_15163 No alias putative beta-d-xylosidase 7 0.03 Orthogroups_2024-Update
Bradi4g20197 No alias Glycosyl hydrolase family protein 0.03 Orthogroups_2024-Update
Glyma.02G013300 No alias beta-xylosidase 2 0.06 Orthogroups_2024-Update
LOC_Os11g19210 No alias beta-D-xylosidase, putative, expressed 0.03 Orthogroups_2024-Update
MA_102349g0010 No alias (at5g64570 : 473.0) Encodes a beta-d-xylosidase that... 0.03 Orthogroups_2024-Update
PSME_00021898-RA No alias (at5g64570 : 951.0) Encodes a beta-d-xylosidase that... 0.03 Orthogroups_2024-Update
PSME_00030271-RA No alias (at5g64570 : 933.0) Encodes a beta-d-xylosidase that... 0.03 Orthogroups_2024-Update
Potri.001G206800 No alias beta-D-xylosidase 4 0.04 Orthogroups_2024-Update
Potri.005G168400 No alias Glycosyl hydrolase family protein 0.04 Orthogroups_2024-Update
Seita.7G257800.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
Seita.8G106400.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004584 dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 393 623
IPR001764 Glyco_hydro_3_N 106 350
IPR026891 Fn3-like 688 754
No external refs found!