Description : winged-helix DNA-binding transcription factor family protein
Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.10G033100 | |
Cluster | HCCA clusters: Cluster_79 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GRMZM2G080274 | No alias | histone H1-3 | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G106550.2 | No alias | linker histone *(H1) | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G106610.2 | No alias | linker histone *(H1) | 0.04 | Orthogroups_2024-Update | |
HORVU5Hr1G106730.2 | No alias | linker histone *(H1) | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G012850.1 | No alias | linker histone *(H1) | 0.04 | Orthogroups_2024-Update | |
LOC_Os03g58470 | No alias | retrotransposon protein, putative, Ty3-gypsy subclass, expressed | 0.03 | Orthogroups_2024-Update | |
MA_500183g0010 | No alias | (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
MA_5243726g0010 | No alias | (p27806|h1_wheat : 91.3) Histone H1 - Triticum aestivum... | 0.04 | Orthogroups_2024-Update | |
MA_6409g0010 | No alias | (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
Potri.005G116600 | No alias | histone H1-3 | 0.03 | Orthogroups_2024-Update | |
Pp1s33_295V6 | No alias | histone h1 | 0.02 | Orthogroups_2024-Update | |
Sobic.010G021300.2 | No alias | linker histone *(H1) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | InterProScan predictions |
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
BP | GO:0006334 | nucleosome assembly | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003713 | transcription coactivator activity | IEP | Predicted GO |
MF | GO:0003997 | acyl-CoA oxidase activity | IEP | Predicted GO |
MF | GO:0004806 | triglyceride lipase activity | IEP | Predicted GO |
CC | GO:0005777 | peroxisome | IEP | Predicted GO |
BP | GO:0005984 | disaccharide metabolic process | IEP | Predicted GO |
BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Predicted GO |
BP | GO:0006635 | fatty acid beta-oxidation | IEP | Predicted GO |
BP | GO:0009062 | fatty acid catabolic process | IEP | Predicted GO |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | Predicted GO |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0016042 | lipid catabolic process | IEP | Predicted GO |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Predicted GO |
BP | GO:0016054 | organic acid catabolic process | IEP | Predicted GO |
MF | GO:0016298 | lipase activity | IEP | Predicted GO |
MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Predicted GO |
MF | GO:0019239 | deaminase activity | IEP | Predicted GO |
BP | GO:0019395 | fatty acid oxidation | IEP | Predicted GO |
BP | GO:0034440 | lipid oxidation | IEP | Predicted GO |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Predicted GO |
CC | GO:0042579 | microbody | IEP | Predicted GO |
BP | GO:0044242 | cellular lipid catabolic process | IEP | Predicted GO |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0046395 | carboxylic acid catabolic process | IEP | Predicted GO |
BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | Predicted GO |
MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 55 | 121 |
No external refs found! |