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  5. Sopen09g031660

Sopen09g031660


Description : Piwi domain


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g031660
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
A4A49_39268 No alias protein argonaute 10 0.02 Orthogroups_2024-Update
At1g69440 No alias Protein argonaute 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C793] 0.02 Orthogroups_2024-Update
Brara.I02739.1 No alias siRNA-binding factor *(AGO2) of non-canonical RdDM pathway 0.02 Orthogroups_2024-Update
GRMZM2G007791 No alias Argonaute family protein 0.03 Orthogroups_2024-Update
GRMZM2G361518 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 Orthogroups_2024-Update
Glyma.09G167100 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.01 Orthogroups_2024-Update
HORVU2Hr1G045050.1 No alias Unknown function 0.01 Orthogroups_2024-Update
HORVU2Hr1G098650.1 No alias siRNA-binding factor *(AGO2) of non-canonical RdDM pathway 0.02 Orthogroups_2024-Update
PSME_00031437-RA No alias (at1g69440 : 981.0) Encodes ARGONAUTE7, a member of the... 0.14 Orthogroups_2024-Update
Seita.5G043300.1 No alias siRNA-integrating factor *(AGO) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032474 Argonaute_N 136 270
IPR003165 Piwi 621 940
IPR003100 PAZ_dom 340 462
IPR032473 Argonaute_Mid_dom 529 606
IPR032472 ArgoL2 472 518
IPR014811 ArgoL1 280 329
No external refs found!