Description : winged-helix DNA-binding transcription factor family protein
Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.10G163300 | |
Cluster | HCCA clusters: Cluster_79 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
27494 | No alias | winged-helix DNA-binding transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
A4A49_02893 | No alias | histone h1 | 0.03 | Orthogroups_2024-Update | |
A4A49_15807 | No alias | histone h1 | 0.04 | Orthogroups_2024-Update | |
At2g18050 | No alias | HIS1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VX64] | 0.04 | Orthogroups_2024-Update | |
Bradi5g19000 | No alias | histone H1-3 | 0.02 | Orthogroups_2024-Update | |
Brara.D01833.1 | No alias | linker histone *(H1) | 0.02 | Orthogroups_2024-Update | |
GRMZM2G080274 | No alias | histone H1-3 | 0.04 | Orthogroups_2024-Update | |
GRMZM2G121221 | No alias | winged-helix DNA-binding transcription factor family protein | 0.05 | Orthogroups_2024-Update | |
GRMZM2G401308 | No alias | winged-helix DNA-binding transcription factor family protein | 0.04 | Orthogroups_2024-Update | |
HORVU2Hr1G094400.5 | No alias | linker histone *(H1) | 0.02 | Orthogroups_2024-Update | |
HORVU5Hr1G106550.2 | No alias | linker histone *(H1) | 0.05 | Orthogroups_2024-Update | |
HORVU5Hr1G106610.2 | No alias | linker histone *(H1) | 0.04 | Orthogroups_2024-Update | |
HORVU5Hr1G106730.2 | No alias | linker histone *(H1) | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G012850.1 | No alias | linker histone *(H1) | 0.03 | Orthogroups_2024-Update | |
LOC_Os07g08710 | No alias | AT hook-containing DNA-binding protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_102574g0010 | No alias | no hits & (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
MA_4008g0010 | No alias | (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
MA_500183g0010 | No alias | (original description: no original description) | 0.05 | Orthogroups_2024-Update | |
MA_5243726g0010 | No alias | (p27806|h1_wheat : 91.3) Histone H1 - Triticum aestivum... | 0.07 | Orthogroups_2024-Update | |
MA_6409g0010 | No alias | (original description: no original description) | 0.05 | Orthogroups_2024-Update | |
PSME_00009292-RA | No alias | (p23444|h1_maize : 104.0) Histone H1 - Zea mays (Maize)... | 0.04 | Orthogroups_2024-Update | |
Potri.005G116600 | No alias | histone H1-3 | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_2062.24 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
evm.model.tig00020780.71 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update | |
evm.model.tig00021123.25 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | InterProScan predictions |
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
BP | GO:0006334 | nucleosome assembly | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
MF | GO:0004806 | triglyceride lipase activity | IEP | Predicted GO |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
MF | GO:0016160 | amylase activity | IEP | Predicted GO |
MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
MF | GO:0016298 | lipase activity | IEP | Predicted GO |
CC | GO:0016592 | mediator complex | IEP | Predicted GO |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0065007 | biological regulation | IEP | Predicted GO |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 21 | 88 |
No external refs found! |