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  5. Glyma.10G163300

Glyma.10G163300


Description : winged-helix DNA-binding transcription factor family protein


Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G163300
Cluster HCCA clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
27494 No alias winged-helix DNA-binding transcription factor family protein 0.03 Orthogroups_2024-Update
A4A49_02893 No alias histone h1 0.03 Orthogroups_2024-Update
A4A49_15807 No alias histone h1 0.04 Orthogroups_2024-Update
At2g18050 No alias HIS1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VX64] 0.04 Orthogroups_2024-Update
Bradi5g19000 No alias histone H1-3 0.02 Orthogroups_2024-Update
Brara.D01833.1 No alias linker histone *(H1) 0.02 Orthogroups_2024-Update
GRMZM2G080274 No alias histone H1-3 0.04 Orthogroups_2024-Update
GRMZM2G121221 No alias winged-helix DNA-binding transcription factor family protein 0.05 Orthogroups_2024-Update
GRMZM2G401308 No alias winged-helix DNA-binding transcription factor family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G094400.5 No alias linker histone *(H1) 0.02 Orthogroups_2024-Update
HORVU5Hr1G106550.2 No alias linker histone *(H1) 0.05 Orthogroups_2024-Update
HORVU5Hr1G106610.2 No alias linker histone *(H1) 0.04 Orthogroups_2024-Update
HORVU5Hr1G106730.2 No alias linker histone *(H1) 0.03 Orthogroups_2024-Update
HORVU7Hr1G012850.1 No alias linker histone *(H1) 0.03 Orthogroups_2024-Update
LOC_Os07g08710 No alias AT hook-containing DNA-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_102574g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_4008g0010 No alias (original description: no original description) 0.03 Orthogroups_2024-Update
MA_500183g0010 No alias (original description: no original description) 0.05 Orthogroups_2024-Update
MA_5243726g0010 No alias (p27806|h1_wheat : 91.3) Histone H1 - Triticum aestivum... 0.07 Orthogroups_2024-Update
MA_6409g0010 No alias (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00009292-RA No alias (p23444|h1_maize : 104.0) Histone H1 - Zea mays (Maize)... 0.04 Orthogroups_2024-Update
Potri.005G116600 No alias histone H1-3 0.03 Orthogroups_2024-Update
evm.model.contig_2062.24 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.tig00020780.71 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
evm.model.tig00021123.25 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006334 nucleosome assembly IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 21 88
No external refs found!