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  5. Glyma.10G170800

Glyma.10G170800


Description : zinc finger protein 1


Gene families : OG_42_0000464 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G170800
Cluster HCCA clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
A4A49_10593 No alias zinc finger ccch domain-containing protein zfn-like protein 0.05 Orthogroups_2024-Update
At3g02830 No alias Zinc finger CCCH domain-containing protein 33... 0.04 Orthogroups_2024-Update
At5g16540 No alias Zinc finger CCCH domain-containing protein 57... 0.05 Orthogroups_2024-Update
Bradi4g08050 No alias zinc finger protein 1 0.03 Orthogroups_2024-Update
Brara.D01996.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
Brara.E03281.1 No alias regulatory protein of RNA homeostasis 0.04 Orthogroups_2024-Update
GRMZM2G087032 No alias zinc finger protein 1 0.03 Orthogroups_2024-Update
GRMZM2G107491 No alias zinc finger protein 1 0.02 Orthogroups_2024-Update
GRMZM2G146514 No alias zinc finger protein 1 0.03 Orthogroups_2024-Update
Kfl00212_0080 kfl00212_0080_v1.... (q5jlb5|zfnl2_orysa : 319.0) Zinc finger CCCH... 0.01 Orthogroups_2024-Update
LOC_Os01g15350 No alias zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g68860 No alias zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 0.03 Orthogroups_2024-Update
Mp2g10620.1 No alias C3H zinc finger transcription factor 0.03 Orthogroups_2024-Update
Potri.019G053200 No alias zinc finger protein 1 0.03 Orthogroups_2024-Update
Seita.5G427800.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
Seita.8G116700.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
Sobic.005G111700.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
Solyc11g008900 No alias Zinc finger transcription factor 65 0.04 Orthogroups_2024-Update
Sopen06g003530 No alias Zinc finger C-x8-C-x5-C-x3-H type (and similar) 0.02 Orthogroups_2024-Update
Sopen11g004680 No alias Zinc finger C-x8-C-x5-C-x3-H type (and similar) 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 132 156
IPR000571 Znf_CCCH 283 308
IPR000571 Znf_CCCH 86 110
IPR000571 Znf_CCCH 40 65
IPR000571 Znf_CCCH 329 354
No external refs found!