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  5. Glyma.10G209000

Glyma.10G209000


Description : pumilio 4


Gene families : OG_42_0001049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G209000
Cluster HCCA clusters: Cluster_419

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G137100 No alias pumilio 2 0.04 Orthogroups_2024-Update
Pp1s96_93V6 No alias pumilio domain-containing protein ppd1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR012940 NABP 318 399
IPR012940 NABP 394 651
IPR001313 Pumilio_RNA-bd_rpt 654 687
IPR001313 Pumilio_RNA-bd_rpt 838 865
IPR001313 Pumilio_RNA-bd_rpt 726 758
IPR001313 Pumilio_RNA-bd_rpt 766 794
IPR001313 Pumilio_RNA-bd_rpt 689 721
IPR001313 Pumilio_RNA-bd_rpt 920 944
IPR001313 Pumilio_RNA-bd_rpt 871 902
IPR001313 Pumilio_RNA-bd_rpt 798 831
No external refs found!