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  5. Glyma.11G004600

Glyma.11G004600


Description : chloride channel D


Gene families : OG_42_0000631 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000631_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G004600
Cluster HCCA clusters: Cluster_521

Target Alias Description ECC score Gene Family Method Actions
A4A49_30881 No alias chloride channel protein clc-b 0.03 Orthogroups_2024-Update
Bradi5g11340 No alias chloride channel C 0.03 Orthogroups_2024-Update
Brara.H00674.1 No alias anion channel / anion 0.03 Orthogroups_2024-Update
Glyma.05G077100 No alias chloride channel B 0.04 Orthogroups_2024-Update
HORVU0Hr1G040330.7 No alias anion channel / anion 0.02 Orthogroups_2024-Update
Pp1s137_191V6 No alias cl-channel clc-7 0.03 Orthogroups_2024-Update
Seita.7G108900.1 No alias anion channel / anion 0.03 Orthogroups_2024-Update
Solyc02g068080 No alias Chloride channel protein (AHRD V3.3 *** M1A9T9_SOLTU) 0.03 Orthogroups_2024-Update
Sopen10g013030 No alias Voltage gated chloride channel 0.03 Orthogroups_2024-Update
evm.model.contig_543.4 No alias (at5g26240 : 157.0) member of Anion channel protein... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity IEA InterProScan predictions
BP GO:0006821 chloride transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006189 'de novo' IMP biosynthetic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001807 Cl-channel_volt-gated 132 555
IPR000644 CBS_dom 603 646
IPR000644 CBS_dom 707 754
No external refs found!