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  5. Glyma.11G140400

Glyma.11G140400


Description : WUSCHEL related homeobox 2


Gene families : OG_42_0000667 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000667_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G140400
Cluster HCCA clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
At2g28610 No alias Homeobox-leucine zipper transcription factor... 0.05 Orthogroups_2024-Update
Glyma.11G076500 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
PSME_00047765-RA No alias (at1g46480 : 131.0) Encodes a WUSCHEL-related homeobox... 0.04 Orthogroups_2024-Update
Seita.5G376400.1 No alias WOX-type transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 30 89
No external refs found!