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  5. Glyma.11G201400

Glyma.11G201400


Description : VIRB2-interacting protein 1


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G201400
Cluster HCCA clusters: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
At2g01240 No alias Reticulon family protein [Source:TAIR;Acc:AT2G01240] 0.03 Orthogroups_2024-Update
Bradi1g06700 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
Bradi2g17560 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
Brara.G02772.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
GRMZM2G157629 No alias VIRB2-interacting protein 1 0.02 Orthogroups_2024-Update
Glyma.07G097100 No alias Reticulon family protein 0.04 Orthogroups_2024-Update
Glyma.19G023300 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
LOC_Os04g29920 No alias reticulon domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00019419-RA No alias (at3g10260 : 207.0) Reticulon family protein; CONTAINS... 0.03 Orthogroups_2024-Update
Sopen07g023440 No alias Reticulon 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003388 Reticulon 62 217
No external refs found!