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  5. Glyma.12G100600

Glyma.12G100600


Description : Homeodomain-like superfamily protein


Gene families : OG_42_0002018 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G100600
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
A4A49_00194 No alias histone h3-like centromeric protein htr12 0.04 Orthogroups_2024-Update
At1g01380 No alias MYB-like transcription factor ETC1... 0.04 Orthogroups_2024-Update
Brara.C02876.1 No alias R3-MYB transcription factor 0.04 Orthogroups_2024-Update
Brara.E00135.1 No alias R3-MYB transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g43180 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 26 66
No external refs found!