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  5. Glyma.12G208800

Glyma.12G208800


Description : TCP family transcription factor 4


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G208800
Cluster HCCA clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
A4A49_18009 No alias transcription factor tcp4 0.05 Orthogroups_2024-Update
Glyma.04G161400 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.04 Orthogroups_2024-Update
Glyma.08G247300 No alias plastid transcription factor 1 0.05 Orthogroups_2024-Update
Glyma.12G228300 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 0.04 Orthogroups_2024-Update
Glyma.18G280700 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G060120.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os01g55100 No alias slTCP3, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g43760 No alias TCP family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.012G059900 No alias TCP family transcription factor 0.07 Orthogroups_2024-Update
Potri.015G050500 No alias TCP family transcription factor 0.06 Orthogroups_2024-Update
Potri.017G094800 No alias plastid transcription factor 1 0.03 Orthogroups_2024-Update
Seita.3G181900.1 No alias TCP-type transcription factor 0.06 Orthogroups_2024-Update
Seita.5G327600.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G299700.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Sopen04g002040 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update
Sopen12g005920 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003713 transcription coactivator activity IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 22 127
No external refs found!