1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.12G236500

Glyma.12G236500


Description : NB-ARC domain-containing disease resistance protein


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G236500
Cluster HCCA clusters: Cluster_358

Target Alias Description ECC score Gene Family Method Actions
At1g12280 No alias Disease resistance protein SUMM2... 0.06 Orthogroups_2024-Update
At1g63350 No alias Disease resistance protein (CC-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At4g27220 No alias NB-ARC domain-containing disease resistance protein... 0.04 Orthogroups_2024-Update
At5g63020 No alias Probable disease resistance protein At5g63020... 0.04 Orthogroups_2024-Update
Bradi5g15560 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
Brara.I01513.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.09G258200 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Orthogroups_2024-Update
LOC_Os01g72680 No alias disease resistance protein RPS2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g10054 No alias disease resistance protein RPS2, putative, expressed 0.03 Orthogroups_2024-Update
MA_10426937g0020 No alias (at4g26090 : 162.0) Encodes a plasma membrane protein... 0.04 Orthogroups_2024-Update
MA_31961g0010 No alias (at5g63020 : 182.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_837862g0010 No alias (at5g63020 : 95.5) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00026738-RA No alias (at1g61180 : 216.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00027124-RA No alias (at4g10780 : 169.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00033120-RA No alias (at1g63350 : 267.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00048940-RA No alias (at4g27220 : 141.0) NB-ARC domain-containing disease... 0.04 Orthogroups_2024-Update
Potri.001G313301 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.018G136301 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.019G002800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T003800 No alias NB-ARC domain-containing disease resistance protein 0.05 Orthogroups_2024-Update
Potri.T003900 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T014500 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.T025230 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T027200 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T027700 No alias NB-ARC domain-containing disease resistance protein 0.05 Orthogroups_2024-Update
Seita.2G176400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen08g004810 No alias NB-ARC domain 0.03 Orthogroups_2024-Update
Sopen10g028090 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 613 671
IPR002182 NB-ARC 233 478
No external refs found!