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  5. Glyma.13G161200

Glyma.13G161200


Description : xylogalacturonan deficient 1


Gene families : OG_42_0000193 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G161200
Cluster HCCA clusters: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
A4A49_26532 No alias putative glycosyltransferase 0.02 Orthogroups_2024-Update
A4A49_37262 No alias putative glycosyltransferase 0.02 Orthogroups_2024-Update
Bradi1g54950 No alias Exostosin family protein 0.05 Orthogroups_2024-Update
Brara.I04610.1 No alias xylogalacturonan xylosyltransferase 0.02 Orthogroups_2024-Update
GRMZM2G001938 No alias Exostosin family protein 0.03 Orthogroups_2024-Update
Glyma.13G148700 No alias Exostosin family protein 0.03 Orthogroups_2024-Update
Glyma.14G114100 No alias Exostosin family protein 0.04 Orthogroups_2024-Update
Potri.018G124900 No alias Exostosin family protein 0.02 Orthogroups_2024-Update
Potri.018G125000 No alias Exostosin family protein 0.03 Orthogroups_2024-Update
Seita.5G072300.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEA InterProScan predictions
MF GO:0016757 transferase activity, transferring glycosyl groups IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR004263 Exostosin 150 437
No external refs found!