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  5. Glyma.15G016700

Glyma.15G016700


Description : golgin candidate 5


Gene families : OG_42_0006229 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.15G016700
Cluster HCCA clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
At1g79830 No alias Golgin Putative 5 [Source:UniProtKB/TrEMBL;Acc:F4HQB9] 0.07 Orthogroups_2024-Update
Bradi2g16820 No alias golgin candidate 5 0.05 Orthogroups_2024-Update
GRMZM2G168654 No alias golgin candidate 5 0.02 Orthogroups_2024-Update
HORVU1Hr1G086390.2 No alias Golgin-type membrane tethering protein *(GC5/TMF) 0.03 Orthogroups_2024-Update
LOC_Os05g48620 No alias tRNA-binding arm, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s13_345V6 No alias tata element modulatory factor 1 0.02 Orthogroups_2024-Update
Pp1s246_5V6 No alias tata element modulatory factor 1 0.02 Orthogroups_2024-Update
evm.model.tig00000388.17 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR022092 TMF_DNA-bd 456 527
IPR022091 TMF_TATA-bd 862 974
No external refs found!