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  5. Glyma.15G215500

Glyma.15G215500


Description : cycling DOF factor 1


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.15G215500
Cluster HCCA clusters: Cluster_394

Target Alias Description ECC score Gene Family Method Actions
At2g28510 No alias Dof zinc finger protein DOF2.1... 0.03 Orthogroups_2024-Update
At2g34140 No alias Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967] 0.03 Orthogroups_2024-Update
At5g60850 No alias OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84] 0.03 Orthogroups_2024-Update
Bradi3g56380 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
Bradi4g04260 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Brara.G01458.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.H01664.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G144172 No alias OBF-binding protein 3 0.04 Orthogroups_2024-Update
GRMZM2G146283 No alias TARGET OF MONOPTEROS 6 0.02 Orthogroups_2024-Update
Glyma.05G025900 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
Glyma.13G177600 No alias OBF-binding protein 3 0.04 Orthogroups_2024-Update
Glyma.13G335200 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.15G039300 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.16G022900 No alias Dof-type zinc finger DNA-binding family protein 0.05 Orthogroups_2024-Update
Glyma.19G023200 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Glyma.19G118000 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_123810g0010 No alias (at5g60850 : 129.0) Encodes a zinc finger protein.; OBF... 0.02 Orthogroups_2024-Update
MA_18267g0010 No alias (at5g62940 : 141.0) HCA2 induces the formation of... 0.03 Orthogroups_2024-Update
MA_7537g0010 No alias (at5g60200 : 128.0) Encodes a Dof-type transcription... 0.04 Orthogroups_2024-Update
MA_83624g0010 No alias (at5g60200 : 114.0) Encodes a Dof-type transcription... 0.03 Orthogroups_2024-Update
PSME_00028077-RA No alias (at5g39660 : 211.0) Dof-type zinc finger... 0.02 Orthogroups_2024-Update
PSME_00041316-RA No alias (at5g39660 : 139.0) Dof-type zinc finger... 0.02 Orthogroups_2024-Update
PSME_00053408-RA No alias (at5g39660 : 183.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
Potri.004G121800 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
Potri.005G149100 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Pp1s124_139V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Seita.9G259300.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.001G078700.1 No alias transcription factor *(DOF) 0.06 Orthogroups_2024-Update
Sobic.003G253200.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.02 Orthogroups_2024-Update
Solyc02g076850 No alias Dof zinc finger protein4 0.04 Orthogroups_2024-Update
Solyc04g070960 No alias Dof zinc finger protein (AHRD V3.3 *-* W9S6D3_9ROSA) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 104 161
No external refs found!