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  5. Glyma.15G268100

Glyma.15G268100


Description : RING/U-box superfamily protein


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.15G268100
Cluster HCCA clusters: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
Bradi1g20480 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G022175 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.001G103900 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.006G164500 No alias COP1-interacting protein 8 0.03 Orthogroups_2024-Update
Solyc04g005740 No alias LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc04g009170 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G19950.3) 0.05 Orthogroups_2024-Update
Solyc09g059130 No alias LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 109 150
IPR039525 RNF126-like_zinc-ribbon 11 43
No external refs found!