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  5. Glyma.16G176600

Glyma.16G176600


Description : Leucine-rich repeat transmembrane protein kinase


Gene families : OG_42_0000172 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G176600
Cluster HCCA clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
Bradi1g31971 No alias disease resistance family protein / LRR family protein 0.02 Orthogroups_2024-Update
LOC_Os10g22930 No alias Cf2/Cf5 disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429732g0010 No alias (at5g44700 : 288.0) Encodes GASSHO2 (GSO2), a putative... 0.03 Orthogroups_2024-Update
PSME_00005532-RA No alias (at4g20140 : 224.0) Encodes GASSHO1 (GSO1), a putative... 0.05 Orthogroups_2024-Update
PSME_00056026-RA No alias (at1g71390 : 89.4) receptor like protein 11 (RLP11);... 0.05 Orthogroups_2024-Update
Seita.1G122700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G271400.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 38 74
IPR001611 Leu-rich_rpt 944 1003
IPR001611 Leu-rich_rpt 714 773
IPR001611 Leu-rich_rpt 127 188
IPR001611 Leu-rich_rpt 201 223
IPR001611 Leu-rich_rpt 338 358
IPR001611 Leu-rich_rpt 362 383
No external refs found!