Description : Ribosomal protein L6 family
Gene families : OG_42_0002024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002024_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.16G189100 | |
Cluster | HCCA clusters: Cluster_426 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g62170 | No alias | Ribosomal protein L6 family | 0.09 | Orthogroups_2024-Update | |
Brara.J00339.1 | No alias | component *(uL6c) of large plastid ribosomal-subunit proteome | 0.04 | Orthogroups_2024-Update | |
Cre09.g415950 | No alias | Ribosomal protein L6 family | 0.06 | Orthogroups_2024-Update | |
HORVU4Hr1G040950.3 | No alias | component *(uL6c) of large plastid ribosomal-subunit proteome | 0.06 | Orthogroups_2024-Update | |
PSME_00056369-RA | No alias | (at1g05190 : 160.0) embryo defective 2394 (emb2394);... | 0.04 | Orthogroups_2024-Update | |
Potri.014G153000 | No alias | Ribosomal protein L6 family | 0.06 | Orthogroups_2024-Update | |
Pp1s138_83V6 | No alias | 50s ribosomal protein l6 | 0.02 | Orthogroups_2024-Update | |
Pp1s431_3V6 | No alias | 50s ribosomal protein l6 | 0.04 | Orthogroups_2024-Update | |
Seita.9G400600.1 | No alias | component *(uL6c) of large plastid ribosomal-subunit proteome | 0.07 | Orthogroups_2024-Update | |
Sobic.001G368500.1 | No alias | component *(uL6c) of large plastid ribosomal-subunit proteome | 0.05 | Orthogroups_2024-Update | |
Solyc12g100160 | No alias | Ribosomal protein L6 family (AHRD V3.3 *** AT1G05190.1) | 0.05 | Orthogroups_2024-Update | |
Sopen12g034790 | No alias | Ribosomal protein L6 | 0.09 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
MF | GO:0019843 | rRNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
BP | GO:0006457 | protein folding | IEP | Predicted GO |
BP | GO:0006508 | proteolysis | IEP | Predicted GO |
BP | GO:0006720 | isoprenoid metabolic process | IEP | Predicted GO |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Predicted GO |
BP | GO:0016485 | protein processing | IEP | Predicted GO |
MF | GO:0016832 | aldehyde-lyase activity | IEP | Predicted GO |
MF | GO:0016872 | intramolecular lyase activity | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0042802 | identical protein binding | IEP | Predicted GO |
MF | GO:0042803 | protein homodimerization activity | IEP | Predicted GO |
BP | GO:0043085 | positive regulation of catalytic activity | IEP | Predicted GO |
BP | GO:0044093 | positive regulation of molecular function | IEP | Predicted GO |
BP | GO:0050790 | regulation of catalytic activity | IEP | Predicted GO |
MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Predicted GO |
BP | GO:0051604 | protein maturation | IEP | Predicted GO |
MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
BP | GO:0065009 | regulation of molecular function | IEP | Predicted GO |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Predicted GO |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
No external refs found! |