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  5. Glyma.17G034500

Glyma.17G034500


Description : Protein phosphatase 2C family protein


Gene families : OG_42_0000281 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000281_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G034500
Cluster HCCA clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Bradi4g03520 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Brara.A03021.1 No alias clade D phosphatase 0.02 Orthogroups_2024-Update
Brara.B00061.1 No alias clade D phosphatase 0.02 Orthogroups_2024-Update
LOC_Os03g04430 No alias protein phosphatase 2C, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G297200 No alias Protein phosphatase 2C family protein 0.02 Orthogroups_2024-Update
Potri.004G177100 No alias Protein phosphatase 2C family protein 0.04 Orthogroups_2024-Update
Pp1s12_51V6 No alias protein phosphatase 0.02 Orthogroups_2024-Update
Pp1s19_76V6 No alias protein phosphatase 0.02 Orthogroups_2024-Update
Seita.4G053300.1 No alias clade D phosphatase & DLSV protein kinase & EC_2.7... 0.03 Orthogroups_2024-Update
Seita.9G023500.1 No alias clade D phosphatase 0.04 Orthogroups_2024-Update
Sopen10g020910 No alias Protein phosphatase 2C 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004583 dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Predicted GO
BP GO:0009245 lipid A biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046493 lipid A metabolic process IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
BP GO:1901269 lipooligosaccharide metabolic process IEP Predicted GO
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 75 322
No external refs found!