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  5. Glyma.17G039200

Glyma.17G039200


Description : pleiotropic drug resistance 9


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G039200
Cluster HCCA clusters: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
173584 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
At3g16340 No alias ABC transporter G family member 29... 0.03 Orthogroups_2024-Update
Glyma.17G039300 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update
Kfl00855_0010 kfl00855_0010_v1.1 (q8gu89|pdr4_orysa : 1415.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
LOC_Os01g24010 No alias pleiotropic drug resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp4g05490.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sopen03g039810 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update
Sopen12g009950 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update
evm.model.tig00000057.108 No alias (at3g16340 : 255.0) pleiotropic drug resistance 1... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013581 PDR_assoc 725 787
IPR003439 ABC_transporter-like 865 1015
IPR029481 ABC_trans_N 92 148
IPR003439 ABC_transporter-like 173 355
IPR013525 ABC_2_trans 1161 1374
IPR013525 ABC_2_trans 509 720
No external refs found!