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  5. Glyma.17G092200

Glyma.17G092200


Description : BAH domain ;TFIIS helical bundle-like domain


Gene families : OG_42_0002194 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G092200
Cluster HCCA clusters: Cluster_466

Target Alias Description ECC score Gene Family Method Actions
At3g48050 No alias Protein SUO [Source:UniProtKB/TrEMBL;Acc:F4JCS8] 0.03 Orthogroups_2024-Update
Bradi3g59560 No alias BAH domain ;TFIIS helical bundle-like domain 0.06 Orthogroups_2024-Update
Bradi3g59577 No alias BAH domain ;TFIIS helical bundle-like domain 0.08 Orthogroups_2024-Update
Glyma.06G184600 No alias BAH domain ;TFIIS helical bundle-like domain 0.03 Orthogroups_2024-Update
Glyma.19G012300 No alias BAH domain ;TFIIS helical bundle-like domain 0.05 Orthogroups_2024-Update
LOC_Os02g50840 No alias BAH domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp4g16160.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Potri.012G077500 No alias BAH domain ;TFIIS helical bundle-like domain 0.03 Orthogroups_2024-Update
Potri.012G077700 No alias BAH domain ;TFIIS helical bundle-like domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0005049 nuclear export signal receptor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR017923 TFIIS_N 217 266
No external refs found!