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  5. Glyma.18G003500

Glyma.18G003500


Description : Sec23/Sec24 protein transport family protein


Gene families : OG_42_0001214 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001214_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G003500
Cluster HCCA clusters: Cluster_317

Target Alias Description ECC score Gene Family Method Actions
Bradi3g38100 No alias Sec23/Sec24 protein transport family protein 0.04 Orthogroups_2024-Update
Bradi4g19570 No alias Sec23/Sec24 protein transport family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G014740.3 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex 0.03 Orthogroups_2024-Update
HORVU5Hr1G068810.2 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex 0.02 Orthogroups_2024-Update
Kfl00310_0160 kfl00310_0160_v1.1 (at3g23660 : 1005.0) Sec23/Sec24 protein transport... 0.03 Orthogroups_2024-Update
MA_90063g0010 No alias (at5g43670 : 262.0) Sec23/Sec24 protein transport family... 0.02 Orthogroups_2024-Update
PSME_00005882-RA No alias (at5g43670 : 881.0) Sec23/Sec24 protein transport family... 0.06 Orthogroups_2024-Update
Pp1s55_55V6 No alias protein transport protein 0.02 Orthogroups_2024-Update
Sobic.005G110499.1 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0006888 ER to Golgi vesicle-mediated transport IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
CC GO:0030127 COPII vesicle coat IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 634 722
IPR006896 Sec23/24_trunk_dom 126 393
IPR012990 Sec23_24_beta_S 404 508
IPR006900 Sec23/24_helical_dom 522 618
IPR006895 Znf_Sec23_Sec24 56 94
No external refs found!