- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : TRF-like 9
Gene families : OG_42_0001495 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001495_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Glycine release: Glyma.18G037900 | |
| Cluster | HCCA clusters: Cluster_47 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g07540 | No alias | Telomere repeat-binding protein 5... | 0.04 | Orthogroups_2024-Update | |
| At3g12560 | No alias | Telomere repeat-binding protein 3... | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G063151 | No alias | TRF-like 9 | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G110309 | No alias | TRF-like 2 | 0.03 | Orthogroups_2024-Update | |
| PSME_00033676-RA | No alias | (at3g12560 : 236.0) Encodes a telomeric DNA-binding... | 0.03 | Orthogroups_2024-Update | |
| Seita.1G040800.1 | No alias | telomeric dsDNA-binding protein | 0.04 | Orthogroups_2024-Update | |
| Seita.9G453400.1 | No alias | telomeric dsDNA-binding protein | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Predicted GO |
| MF | GO:0004366 | glycerol-3-phosphate O-acyltransferase activity | IEP | Predicted GO |
| MF | GO:0004664 | prephenate dehydratase activity | IEP | Predicted GO |
| MF | GO:0005048 | signal sequence binding | IEP | Predicted GO |
| MF | GO:0005542 | folic acid binding | IEP | Predicted GO |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0005985 | sucrose metabolic process | IEP | Predicted GO |
| BP | GO:0006558 | L-phenylalanine metabolic process | IEP | Predicted GO |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Predicted GO |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Predicted GO |
| MF | GO:0008686 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | IEP | Predicted GO |
| BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | Predicted GO |
| BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predicted GO |
| BP | GO:0010207 | photosystem II assembly | IEP | Predicted GO |
| MF | GO:0016157 | sucrose synthase activity | IEP | Predicted GO |
| MF | GO:0016160 | amylase activity | IEP | Predicted GO |
| MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Predicted GO |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Predicted GO |
| MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Predicted GO |
| MF | GO:0031406 | carboxylic acid binding | IEP | Predicted GO |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Predicted GO |
| MF | GO:0033218 | amide binding | IEP | Predicted GO |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Predicted GO |
| MF | GO:0042277 | peptide binding | IEP | Predicted GO |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0043177 | organic acid binding | IEP | Predicted GO |
| BP | GO:0045185 | maintenance of protein location | IEP | Predicted GO |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046923 | ER retention sequence binding | IEP | Predicted GO |
| BP | GO:0051235 | maintenance of location | IEP | Predicted GO |
| BP | GO:0051651 | maintenance of location in cell | IEP | Predicted GO |
| BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
| MF | GO:0072341 | modified amino acid binding | IEP | Predicted GO |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Predicted GO |
| BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | Predicted GO |
| MF | GO:2001070 | starch binding | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |