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  5. Glyma.18G044000

Glyma.18G044000


Description : Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G044000
Cluster HCCA clusters: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Brara.F01931.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G040800 No alias Regulator of chromosome condensation (RCC1) family with... 0.04 Orthogroups_2024-Update
MA_54149g0010 No alias (at5g42140 : 796.0) Regulator of chromosome condensation... 0.03 Orthogroups_2024-Update
PSME_00026680-RA No alias (at5g19420 : 748.0) Regulator of chromosome condensation... 0.04 Orthogroups_2024-Update
Sopen11g024860 No alias Regulator of chromosome condensation (RCC1) repeat 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001849 PH_domain 18 124
IPR013591 Brevis_radix_dom 998 1053
IPR000408 Reg_chr_condens 374 425
IPR000408 Reg_chr_condens 596 644
IPR000408 Reg_chr_condens 323 371
IPR000408 Reg_chr_condens 492 541
IPR000408 Reg_chr_condens 430 478
IPR000306 Znf_FYVE 654 712
No external refs found!