1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.18G050800

Glyma.18G050800


Description : Phototropic-responsive NPH3 family protein


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G050800
Cluster HCCA clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
At1g30440 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Orthogroups_2024-Update
Bradi1g13890 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
GRMZM5G812926 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.08G135600 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.09G085200 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Solyc05g013570 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 181 435
IPR000210 BTB/POZ_dom 22 118
No external refs found!