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Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Glycine release: Glyma.18G134700 | |
| Cluster | HCCA clusters: Cluster_127 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 171135 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.A02436.1 | No alias | RNA editing factor *(CRR2) | 0.03 | Orthogroups_2024-Update | |
| Brara.G01460.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Brara.H01279.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G019689 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G020008 | No alias | mitochondrial RNAediting factor 1 | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G031588 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G060337 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G076257 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G099875 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G158839 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G331779 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G430710 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.07G159200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.07G249400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.13G313200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G036010.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU3Hr1G080810.1 | No alias | RNA editing factor *(MEF10) | 0.02 | Orthogroups_2024-Update | |
| HORVU3Hr1G115530.39 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G066140.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G014780.12 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G027560.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g62690 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_99849g0020 | No alias | (at4g02750 : 535.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00024152-RA | No alias | (at2g13600 : 434.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00036103-RA | No alias | (at2g13600 : 422.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00054324-RA | No alias | (at3g24000 : 542.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| Potri.002G237100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s103_35V6 | No alias | MZB10.7; pentatricopeptide (PPR) repeat-containing... | 0.02 | Orthogroups_2024-Update | |
| Seita.2G247200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.3G069000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G069300.2 | No alias | RNA editing factor *(DEK36) | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G347100.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G436600.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G509700.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G292300.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.002G389200.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.004G053100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.005G210700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.007G006800.3 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G136200.1 | No alias | RNA editing factor *(MEF32) | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G238700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc02g079380 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Sopen01g002910 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
| Sopen01g038950 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
| Sopen02g033370 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen02g039140 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
| Sopen04g036510 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen11g029050 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000030 | mannosyltransferase activity | IEP | Predicted GO |
| MF | GO:0004584 | dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity | IEP | Predicted GO |
| MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
| BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
| BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
| BP | GO:0006479 | protein methylation | IEP | Predicted GO |
| BP | GO:0006480 | N-terminal protein amino acid methylation | IEP | Predicted GO |
| BP | GO:0006497 | protein lipidation | IEP | Predicted GO |
| BP | GO:0006505 | GPI anchor metabolic process | IEP | Predicted GO |
| BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Predicted GO |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Predicted GO |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Predicted GO |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Predicted GO |
| BP | GO:0006665 | sphingolipid metabolic process | IEP | Predicted GO |
| BP | GO:0006672 | ceramide metabolic process | IEP | Predicted GO |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0008213 | protein alkylation | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Predicted GO |
| MF | GO:0016301 | kinase activity | IEP | Predicted GO |
| BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
| BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
| BP | GO:0031365 | N-terminal protein amino acid modification | IEP | Predicted GO |
| BP | GO:0036211 | protein modification process | IEP | Predicted GO |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
| BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 465 | 512 |
| IPR002885 | Pentatricopeptide_repeat | 364 | 410 |
| IPR002885 | Pentatricopeptide_repeat | 58 | 104 |
| IPR002885 | Pentatricopeptide_repeat | 261 | 307 |
| IPR002885 | Pentatricopeptide_repeat | 161 | 191 |
| IPR002885 | Pentatricopeptide_repeat | 30 | 56 |
| IPR002885 | Pentatricopeptide_repeat | 133 | 159 |
| No external refs found! |