Glyma.19G118000

Description : cycling DOF factor 3

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.19G118000
Cluster	HCCA clusters: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
A4A49_04752	No alias	dof zinc finger protein dof3.5	0.02	Orthogroups_2024-Update
A4A49_10722	No alias	dof zinc finger protein dof2.4	0.03	Orthogroups_2024-Update
A4A49_24184	No alias	dof zinc finger protein dof3.1	0.02	Orthogroups_2024-Update
A4A49_28645	No alias	dof zinc finger protein dof5.1	0.03	Orthogroups_2024-Update
At1g51700	No alias	Dof zinc finger protein DOF1.7...	0.03	Orthogroups_2024-Update
At1g64620	No alias	Dof zinc finger protein DOF1.8...	0.04	Orthogroups_2024-Update
At2g28810	No alias	Dof zinc finger protein DOF2.2...	0.03	Orthogroups_2024-Update
At2g34140	No alias	Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967]	0.04	Orthogroups_2024-Update
At2g37590	No alias	Dof zinc finger protein DOF2.4...	0.04	Orthogroups_2024-Update
Bradi1g15420	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Bradi2g19930	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Bradi4g04260	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Brara.B03961.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.D02286.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Brara.F01530.1	No alias	transcription factor *(DOF)	0.06	Orthogroups_2024-Update
Brara.F01753.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.G02475.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
GRMZM2G045678	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
GRMZM2G089949	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
GRMZM2G144172	No alias	OBF-binding protein 3	0.04	Orthogroups_2024-Update
Glyma.01G049400	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.05G018100	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
Glyma.07G012100	No alias	DOF zinc finger protein 1	0.04	Orthogroups_2024-Update
Glyma.09G237000	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.12G063800	No alias	OBF-binding protein 3	0.03	Orthogroups_2024-Update
Glyma.13G177600	No alias	OBF-binding protein 3	0.03	Orthogroups_2024-Update
Glyma.13G230200	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.15G039300	No alias	OBF-binding protein 3	0.06	Orthogroups_2024-Update
Glyma.15G215500	No alias	cycling DOF factor 1	0.03	Orthogroups_2024-Update
Glyma.17G101000	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.17G180600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.18G260500	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Glyma.20G035200	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
HORVU2Hr1G017290.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
HORVU3Hr1G116260.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
HORVU4Hr1G013890.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
LOC_Os02g47810	No alias	dof zinc finger domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g55610	No alias	dof zinc finger domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_83624g0010	No alias	(at5g60200 : 114.0) Encodes a Dof-type transcription...	0.04	Orthogroups_2024-Update
MA_97259g0020	No alias	(at5g62430 : 134.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
PSME_00053408-RA	No alias	(at5g39660 : 183.0) Dof-type zinc finger...	0.04	Orthogroups_2024-Update
PSME_00056872-RA	No alias	(at5g60200 : 116.0) Encodes a Dof-type transcription...	0.03	Orthogroups_2024-Update
Potri.004G038800	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
Potri.005G149100	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Pp1s18_64V6	No alias	No description available	0.02	Orthogroups_2024-Update
Pp1s267_24V6	No alias	cycling dof factor 2	0.02	Orthogroups_2024-Update
Seita.3G327800.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.3G371900.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.5G052700.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.6G192200.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.9G259300.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.002G236600.2	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.006G267900.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.009G196100.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Solyc02g067230	No alias	Dof zinc finger protein3	0.03	Orthogroups_2024-Update
Solyc02g088070	No alias	Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA)	0.03	Orthogroups_2024-Update
Solyc02g090220	No alias	Zinc finger, Dof-type (AHRD V3.3 *** A0A124SC40_CYNCS)	0.02	Orthogroups_2024-Update
Solyc04g070960	No alias	Dof zinc finger protein (AHRD V3.3 - W9S6D3_9ROSA)	0.03	Orthogroups_2024-Update
Solyc05g007880	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA)	0.03	Orthogroups_2024-Update
Solyc06g062520	No alias	Dof zinc finger protein (AHRD V3.3 *** W9QMS6_9ROSA)	0.04	Orthogroups_2024-Update
Solyc08g082910	No alias	Dof zinc finger protein (AHRD V3.3 *** W9RTF5_9ROSA)	0.03	Orthogroups_2024-Update
Solyc10g086440	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA)	0.03	Orthogroups_2024-Update
Sopen02g015430	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen02g022790	No alias	Dof domain, zinc finger	0.04	Orthogroups_2024-Update
Sopen02g023480	No alias	Dof domain, zinc finger	0.05	Orthogroups_2024-Update
Sopen02g032780	No alias	Dof domain, zinc finger	0.04	Orthogroups_2024-Update
Sopen02g035000	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen06g022000	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004417	hydroxyethylthiazole kinase activity	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0006633	fatty acid biosynthetic process	IEP	Predicted GO
BP	GO:0006766	vitamin metabolic process	IEP	Predicted GO
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predicted GO
BP	GO:0006772	thiamine metabolic process	IEP	Predicted GO
BP	GO:0006790	sulfur compound metabolic process	IEP	Predicted GO
BP	GO:0009110	vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0009228	thiamine biosynthetic process	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
MF	GO:0016787	hydrolase activity	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0048518	positive regulation of biological process	IEP	Predicted GO
BP	GO:0048580	regulation of post-embryonic development	IEP	Predicted GO
BP	GO:0048582	positive regulation of post-embryonic development	IEP	Predicted GO
BP	GO:0050793	regulation of developmental process	IEP	Predicted GO
BP	GO:0051094	positive regulation of developmental process	IEP	Predicted GO
BP	GO:0051239	regulation of multicellular organismal process	IEP	Predicted GO
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:2000026	regulation of multicellular organismal development	IEP	Predicted GO
BP	GO:2000038	regulation of stomatal complex development	IEP	Predicted GO
BP	GO:2000123	positive regulation of stomatal complex development	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	104	160

External Links

No external refs found!

Glyma.19G118000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation