Glyma.20G079300

Description : heat shock protein 60

Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.20G079300
Cluster	HCCA clusters: Cluster_459

Target	Alias	Description	ECC score	Gene Family Method
AC215201.3_FG005	No alias	chaperonin-60alpha	0.03	Orthogroups_2024-Update
At2g33210	No alias	Chaperonin CPN60-like 1, mitochondrial...	0.03	Orthogroups_2024-Update
At3g13860	No alias	Chaperonin CPN60-like 2, mitochondrial...	0.03	Orthogroups_2024-Update
At5g56500	No alias	Chaperonin 60 subunit beta 3, chloroplastic...	0.04	Orthogroups_2024-Update
Bradi2g18260	No alias	heat shock protein 60-3A	0.03	Orthogroups_2024-Update
Bradi4g38090	No alias	TCP-1/cpn60 chaperonin family protein	0.04	Orthogroups_2024-Update
Brara.B00789.1	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.04	Orthogroups_2024-Update
Brara.C01696.1	No alias	chaperone *(Hsp60)	0.03	Orthogroups_2024-Update
Brara.C03496.1	No alias	chaperone *(Hsp60)	0.06	Orthogroups_2024-Update
Cre04.g231222	No alias	chaperonin-60alpha	0.01	Orthogroups_2024-Update
Cre06.g309100	No alias	heat shock protein 60	0.01	Orthogroups_2024-Update
GRMZM2G416120	No alias	heat shock protein 60	0.03	Orthogroups_2024-Update
HORVU0Hr1G038830.19	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.04	Orthogroups_2024-Update
HORVU1Hr1G038680.8	No alias	Unknown function	0.05	Orthogroups_2024-Update
Kfl00076_0150	kfl00076_0150_v1....	(p08927\|rubb_pea : 851.0) RuBisCO large subunit-binding...	0.02	Orthogroups_2024-Update
Kfl00292_0140	kfl00292_0140_v1.1	(q05046\|ch62_cucma : 837.0) Chaperonin CPN60-2,...	0.02	Orthogroups_2024-Update
PSME_00000537-RA	No alias	(p21239\|rub1_brana : 764.0) RuBisCO large...	0.03	Orthogroups_2024-Update
Potri.002G252900	No alias	heat shock protein 60	0.04	Orthogroups_2024-Update
Seita.2G129300.1	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.02	Orthogroups_2024-Update
Seita.3G163700.1	No alias	chaperone *(Hsp60)	0.04	Orthogroups_2024-Update
Seita.9G231400.1	No alias	chaperone *(Hsp60)	0.06	Orthogroups_2024-Update
Seita.9G543300.1	No alias	chaperone *(Hsp60)	0.01	Orthogroups_2024-Update
Sobic.001G228200.1	No alias	chaperone *(Hsp60)	0.04	Orthogroups_2024-Update
Solyc02g068730	No alias	Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI)	0.04	Orthogroups_2024-Update
Solyc03g121640	No alias	Chaperonin Cpn60 (AHRD V3.3 *** A0A124SDT3_CYNCS)	0.03	Orthogroups_2024-Update
Solyc09g091180	No alias	Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH)	0.05	Orthogroups_2024-Update
Sopen03g040450	No alias	TCP-1/cpn60 chaperonin family	0.02	Orthogroups_2024-Update
Sopen05g031970	No alias	TCP-1/cpn60 chaperonin family	0.03	Orthogroups_2024-Update
Sopen09g034150	No alias	TCP-1/cpn60 chaperonin family	0.03	Orthogroups_2024-Update
evm.model.tig00001269.7	No alias	(q05046\|ch62_cucma : 728.0) Chaperonin CPN60-2,...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	Predicted GO
MF	GO:0001882	nucleoside binding	IEP	Predicted GO
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003774	motor activity	IEP	Predicted GO
MF	GO:0003777	microtubule motor activity	IEP	Predicted GO
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Predicted GO
MF	GO:0003916	DNA topoisomerase activity	IEP	Predicted GO
MF	GO:0003918	DNA topoisomerase type II (ATP-hydrolyzing) activity	IEP	Predicted GO
MF	GO:0003924	GTPase activity	IEP	Predicted GO
MF	GO:0004175	endopeptidase activity	IEP	Predicted GO
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predicted GO
MF	GO:0004252	serine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004402	histone acetyltransferase activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
CC	GO:0005634	nucleus	IEP	Predicted GO
CC	GO:0005643	nuclear pore	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006265	DNA topological change	IEP	Predicted GO
BP	GO:0006325	chromatin organization	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
BP	GO:0006473	protein acetylation	IEP	Predicted GO
BP	GO:0006475	internal protein amino acid acetylation	IEP	Predicted GO
BP	GO:0006508	proteolysis	IEP	Predicted GO
BP	GO:0006547	histidine metabolic process	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0006783	heme biosynthetic process	IEP	Predicted GO
BP	GO:0006784	heme a biosynthetic process	IEP	Predicted GO
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0006928	movement of cell or subcellular component	IEP	Predicted GO
BP	GO:0007017	microtubule-based process	IEP	Predicted GO
BP	GO:0007018	microtubule-based movement	IEP	Predicted GO
MF	GO:0008017	microtubule binding	IEP	Predicted GO
MF	GO:0008080	N-acetyltransferase activity	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
MF	GO:0008094	DNA-dependent ATPase activity	IEP	Predicted GO
MF	GO:0008131	primary amine oxidase activity	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
MF	GO:0008536	Ran GTPase binding	IEP	Predicted GO
MF	GO:0009982	pseudouridine synthase activity	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
MF	GO:0015631	tubulin binding	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0016407	acetyltransferase activity	IEP	Predicted GO
MF	GO:0016410	N-acyltransferase activity	IEP	Predicted GO
MF	GO:0016462	pyrophosphatase activity	IEP	Predicted GO
BP	GO:0016573	histone acetylation	IEP	Predicted GO
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Predicted GO
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016787	hydrolase activity	IEP	Predicted GO
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predicted GO
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predicted GO
MF	GO:0016887	ATPase activity	IEP	Predicted GO
MF	GO:0017056	structural constituent of nuclear pore	IEP	Predicted GO
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	Predicted GO
BP	GO:0018394	peptidyl-lysine acetylation	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
CC	GO:0030684	preribosome	IEP	Predicted GO
CC	GO:0032040	small-subunit processome	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0034061	DNA polymerase activity	IEP	Predicted GO
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Predicted GO
BP	GO:0034470	ncRNA processing	IEP	Predicted GO
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
BP	GO:0042168	heme metabolic process	IEP	Predicted GO
BP	GO:0042440	pigment metabolic process	IEP	Predicted GO
MF	GO:0042623	ATPase activity, coupled	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
BP	GO:0043543	protein acylation	IEP	Predicted GO
CC	GO:0044428	nuclear part	IEP	Predicted GO
BP	GO:0046148	pigment biosynthetic process	IEP	Predicted GO
BP	GO:0046160	heme a metabolic process	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
MF	GO:0048038	quinone binding	IEP	Predicted GO
BP	GO:0052803	imidazole-containing compound metabolic process	IEP	Predicted GO
MF	GO:0061505	DNA topoisomerase II activity	IEP	Predicted GO
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Predicted GO
BP	GO:0071103	DNA conformation change	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	54	554

External Links

No external refs found!

Glyma.20G079300

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation