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  5. Glyma.20G172600

Glyma.20G172600


Description : Laccase/Diphenol oxidase family protein


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.20G172600
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
A4A49_13107 No alias laccase-14 0.03 Orthogroups_2024-Update
At2g40370 No alias Laccase-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIY8] 0.04 Orthogroups_2024-Update
Brara.E01368.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
GRMZM2G336337 No alias laccase 12 0.02 Orthogroups_2024-Update
Glyma.18G183500 No alias laccase 17 0.03 Orthogroups_2024-Update
LOC_Os05g38390 No alias laccase precursor protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g38420 No alias laccase precursor protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.005G200700 No alias laccase 14 0.04 Orthogroups_2024-Update
Potri.009G102700 No alias laccase 11 0.03 Orthogroups_2024-Update
Potri.016G106000 No alias laccase 7 0.03 Orthogroups_2024-Update
Potri.019G124300 No alias laccase 3 0.03 Orthogroups_2024-Update
Pp1s17_180V6 No alias laccase 90c 0.03 Orthogroups_2024-Update
Seita.8G252500.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.05 Orthogroups_2024-Update
Solyc06g082240 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g085090 No alias Laccase (AHRD V3.3 *** P93366_TOBAC) 0.03 Orthogroups_2024-Update
Sopen02g029800 No alias Multicopper oxidase 0.02 Orthogroups_2024-Update
Sopen02g029810 No alias Multicopper oxidase 0.02 Orthogroups_2024-Update
Sopen09g007120 No alias Multicopper oxidase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 434 549
IPR011707 Cu-oxidase_3 33 147
IPR001117 Cu-oxidase 160 310
No external refs found!