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  5. Glyma.20G250200

Glyma.20G250200


Description : hydroxyproline-rich glycoprotein family protein


Gene families : OG_42_0001911 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001911_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.20G250200
Cluster HCCA clusters: Cluster_441

Target Alias Description ECC score Gene Family Method Actions
Bradi3g44310 No alias hydroxyproline-rich glycoprotein family protein 0.03 Orthogroups_2024-Update
Bradi4g34820 No alias hydroxyproline-rich glycoprotein family protein 0.04 Orthogroups_2024-Update
Brara.D02039.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.19G097400 No alias hydroxyproline-rich glycoprotein family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
CC GO:0005737 cytoplasm IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004148 BAR_dom 55 227
No external refs found!