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  5. Glyma.U005701

Glyma.U005701


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000306 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000306_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.U005701
Cluster HCCA clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
A4A49_07434 No alias putative polygalacturonase 0.04 Orthogroups_2024-Update
At5g17200 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
Bradi1g04610 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g18030 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g18040 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g18060 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.C03581.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Brara.G00978.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Glyma.10G103200 No alias polygalacturonase abscission zone A. thaliana 0.04 Orthogroups_2024-Update
Glyma.14G044200 No alias Pectin lyase-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.15G275400 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G079130.2 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
HORVU6Hr1G015390.3 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Seita.5G383600.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Sobic.001G045400.1 No alias polygalacturonase *(QRT2) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Solyc03g116580 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT1G80170.1) 0.03 Orthogroups_2024-Update
Solyc12g009420 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G57510.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 3 258
No external refs found!