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  5. A4A49_03229

A4A49_03229


Description : pentatricopeptide repeat-containing protein, chloroplastic


Gene families : OG_42_0000374 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_03229
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
At1g62680 No alias Pentatricopeptide repeat-containing protein At1g62680,... 0.04 Orthogroups_2024-Update
Brara.I01437.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen06g002220 No alias PPR repeat family 0.05 Orthogroups_2024-Update
Sopen06g002690 No alias PPR repeat family 0.02 Orthogroups_2024-Update
evm.model.contig_2162.2 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 319 368
IPR002885 Pentatricopeptide_repeat 144 193
IPR002885 Pentatricopeptide_repeat 494 542
IPR002885 Pentatricopeptide_repeat 249 298
IPR002885 Pentatricopeptide_repeat 389 438
IPR002885 Pentatricopeptide_repeat 213 243
IPR002885 Pentatricopeptide_repeat 464 486
No external refs found!