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  5. Solyc02g089990

Solyc02g089990


Description : HTH-type transcriptional regulator (AHRD V3.3 *** AT2G23690.1)


Gene families : OG_42_0000559 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g089990
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Seita.1G053500.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity IEP Predicted GO
CC GO:0005834 heterotrimeric G-protein complex IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:1905360 GTPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 1 161
No external refs found!