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  5. Sopen10g029320

Sopen10g029320


Description : SBP domain


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g029320
Cluster HCCA clusters: Cluster_349

Target Alias Description ECC score Gene Family Method Actions
At5g43270 No alias Squamosa promoter-binding-like protein 2... 0.02 Orthogroups_2024-Update
At5g50570 No alias Squamosa promoter-binding-like protein 13B... 0.02 Orthogroups_2024-Update
Brara.F03810.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I01777.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G063700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Glyma.19G094000 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.04 Orthogroups_2024-Update
Sopen03g033930 No alias SBP domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 76 149
No external refs found!