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  5. A4A49_11116

A4A49_11116


Description : putative e3 ubiquitin-protein ligase rhc1a


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Nicotiana release: A4A49_11116
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
18753 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
8109 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
At3g60080 No alias At3g60080 [Source:UniProtKB/TrEMBL;Acc:Q9M1D5] 0.03 Orthogroups_2024-Update
Bradi1g35540 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g49196 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g37800 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Glyma.02G108300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G017500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os06g42700 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g36170 No alias cytokinesis negative regulator RCP1, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G231000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G087200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 7 37
IPR001841 Znf_RING 189 231
No external refs found!