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  5. A4A49_15807

A4A49_15807


Description : histone h1


Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_15807
Cluster HCCA clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Brara.E01274.1 No alias linker histone *(H1) 0.03 Orthogroups_2024-Update
Glyma.10G163300 No alias winged-helix DNA-binding transcription factor family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G094390.5 No alias linker histone *(H1) 0.02 Orthogroups_2024-Update
MA_196776g0010 No alias (original description: no original description) 0.02 Orthogroups_2024-Update
MA_5243726g0010 No alias (p27806|h1_wheat : 91.3) Histone H1 - Triticum aestivum... 0.03 Orthogroups_2024-Update
Seita.2G060000.1 No alias linker histone *(H1) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006334 nucleosome assembly IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 57 122
No external refs found!