1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen11g001320

Sopen11g001320


Description : Ring finger domain


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g001320
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
A4A49_10444 No alias e3 ubiquitin-protein ligase atl9 0.02 Orthogroups_2024-Update
A4A49_21361 No alias ring-h2 finger protein atl78 0.02 Orthogroups_2024-Update
A4A49_35950 No alias e3 ubiquitin-protein ligase atl41 0.03 Orthogroups_2024-Update
A4A49_36944 No alias ring-h2 finger protein atl52 0.02 Orthogroups_2024-Update
A4A49_37314 No alias e3 ubiquitin-protein ligase atl9 0.02 Orthogroups_2024-Update
A4A49_40065 No alias ring-h2 finger protein atl70 0.03 Orthogroups_2024-Update
At5g41450 No alias RING/U-box superfamily protein... 0.02 Orthogroups_2024-Update
Bradi1g32080 No alias RING-H2 finger A3A 0.02 Orthogroups_2024-Update
Bradi2g22650 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.B02994.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.C01887.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F00385.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.F03530.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.J02480.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G026562 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G194400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G015200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G183600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G121400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G157400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G173800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G060500 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G080840.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
MA_10436208g0010 No alias (at1g72200 : 100.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_227897g0010 No alias (at3g16720 : 112.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
MA_308999g0010 No alias (at1g72310 : 80.9) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
MA_80729g0030 No alias (at3g16720 : 139.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
Potri.001G400600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G036800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G144200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G201500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G057300 No alias RING-H2 finger A3A 0.02 Orthogroups_2024-Update
Potri.010G243500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G091000 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Pp1s41_270V6 No alias zinc finger (c3hc4-type ring finger) family protein 0.02 Orthogroups_2024-Update
Seita.7G205000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G348500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc01g088440 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc08g076830 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc11g005290 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.02 Orthogroups_2024-Update
Sopen01g048080 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen02g017550 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 140 183
No external refs found!