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  5. Sopen11g003460

Sopen11g003460


Description : DEAD/DEAH box helicase


Gene families : OG_42_0004841 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004841_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g003460
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
At2g28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
HORVU4Hr1G025320.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.010G234000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Seita.7G320300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G034400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc11g007610 No alias Dead box ATP-dependent RNA helicase, putative (AHRD V3.3... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 185 302
No external refs found!