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  5. A4A49_23663

A4A49_23663


Description : e3 ubiquitin-protein ligase cip8


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_23663
Cluster HCCA clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
18753 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
8109 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g35540 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g44277 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os12g02620 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10428335g0020 No alias (at3g19950 : 167.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.006G032100 No alias RING-H2 finger C1A 0.03 Orthogroups_2024-Update
Potri.006G112100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.7G303700.1 No alias gibberellin modification enzyme *(ELA) & EC_1.14... 0.03 Orthogroups_2024-Update
Sopen01g046700 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 19 52
IPR001841 Znf_RING 292 334
No external refs found!