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  5. Solyc02g091180

Solyc02g091180


Description : LOW QUALITY:DUF4228 domain protein (AHRD V3.3 *** G7IAV0_MEDTR)


Gene families : OG_42_0001139 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g091180
Cluster HCCA clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G323387 No alias Function unknown 0.03 Orthogroups_2024-Update
MA_21964g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00055830-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Sobic.009G224200.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 1 160
No external refs found!