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  5. A4A49_24988

A4A49_24988


Description : dna-directed rna polymerase 2b, chloroplasticmitochondrial


Gene families : OG_42_0001092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_24988
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Bradi1g31066 No alias DNA/RNA polymerases superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G263000 No alias male gametophyte defective 3 0.02 Orthogroups_2024-Update
Glyma.17G071600 No alias DNA/RNA polymerases superfamily protein 0.02 Orthogroups_2024-Update
Potri.018G103300 No alias DNA/RNA polymerases superfamily protein 0.02 Orthogroups_2024-Update
Solyc02g089330 No alias DNA-directed RNA polymerase (AHRD V3.3 *-* A0A0V0IYF1_SOLCH) 0.04 Orthogroups_2024-Update
evm.model.tig00021493.48 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.tig00021493.49 No alias (q8l6j3|rpo2b_tobac : 377.0) DNA-directed RNA polymerase... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA InterProScan predictions
BP GO:0006351 transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029262 RPOL_N 192 510
IPR002092 DNA-dir_Rpol_phage-type 633 1024
No external refs found!