Sopen11g009130

Description : 5'-3' exonuclease, N-terminal resolvase-like domain

Gene families : OG_42_0005916 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005916_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen11g009130
Cluster	HCCA clusters: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g56537	No alias	5\'-3\' exonuclease family protein	0.03	Orthogroups_2024-Update
Seita.5G398500.1	No alias	plastidial RNA exonuclease	0.04	Orthogroups_2024-Update
Sobic.003G373300.1	No alias	plastidial RNA exonuclease	0.02	Orthogroups_2024-Update
Solyc11g017230	No alias	5'-3' exonuclease family protein (AHRD V3.3 *** AT1G34380.2)	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003824	catalytic activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR020046	5-3_exonucl_a-hlix_arch_N	101	227
IPR020045	DNA_polI_H3TH	256	341

External Links

No external refs found!